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20 Best Places To Go Kayaking In San Diego (2025 Guide)

By: Dave Samuel
Updated On: August 3, 2025

The first time I paddled into Emerald Cave at La Jolla, I knew San Diego had ruined me for kayaking anywhere else. Where else can you spot leopard sharks in the morning, grab fish tacos for lunch, and finish the day surfing your kayak back through gentle waves? After spending the last decade exploring every launch spot from Coronado to Carlsbad, I've discovered that kayaking near San Diego offers something special for every paddler.

Last weekend, I watched a gray whale breach just 200 yards from my kayak off Point Loma - moments like these remind me why San Diego consistently ranks among the best paddling destinations in the country. Whether you're looking for a peaceful flatwater paddle or an adventurous ocean tour, I'll share my favorite spots that showcase why our 70 miles of coastline and numerous inland lakes make this paddler's paradise.

Quick Navigation: San Diego Kayaking By Region

RegionBest ForWater TypeDifficulty
La JollaSea caves, marine lifeOceanIntermediate
Mission BayFamilies, beginnersCalm bayEasy
South BayWildlife, solitudeBay/wetlandsEasy
Inland LakesFishing, relaxationFlatwaterEasy
North CountyVariety, less crowdsMixedAll levels

Ocean & Coastal Kayaking Adventures

1. La Jolla Caves - The Crown Jewel

I'll never forget the first time I entered Sunny Jim's Cave from the water side - the way sunlight filters through the opening creates an otherworldly glow that photos just can't capture. La Jolla offers seven sea caves to explore, though conditions determine which ones you can safely enter.

What Makes It Special:

  • Leopard sharks gather here June through September (completely harmless!)
  • Sea lions lounging on the rocks provide endless entertainment
  • Crystal-clear water offers 30+ feet of visibility on calm days
  • The protected Ecological Reserve teems with garibaldi fish

Insider Tips: Morning paddles beat the afternoon wind and crowds. If you're new to ocean kayaking, I strongly recommend joining a kayak tour San Diego operator here first - the caves look inviting, but surge conditions can change quickly. I learned this the hard way when a rogue wave nearly pinned me against the cave wall during my overly confident solo attempt.

Launch Point: La Jolla Shores Beach (2000 Avenida De La Playa) Rentals: La Jolla Kayak, Everyday California, Bike & Kayak Tours Best Time: Early morning, May-October

2. Mission Bay - Your Gateway to Kayaking

Mission Bay saved my kayaking addiction when I first moved here. This 4,235-acre aquatic playground offers 27 miles of shoreline with zero ocean swells - perfect for building confidence. Last month, I taught my 6-year-old nephew to paddle here, and we spent hours chasing the SeaWorld fireworks reflections across the water.

The bay divides into several distinct areas:

  • Sail Bay: Wide open waters, great for longer paddles
  • Fiesta Bay: Protected coves, ideal for beginners
  • Crown Point: Launch here to explore hidden channels

Our beginner's guide to kayaking covers essential skills you'll want to practice in these calm waters before tackling the ocean.

Hidden Gem: Paddle through the channels near Campland on the Bay during high tide - it feels like exploring the Everglades, complete with blue herons and the occasional ray gliding beneath your kayak.

Launch Points: Multiple free launches including Sail Bay, Santa Clara Point Rentals: Aqua Adventures, Mission Bay Aquatic Center Best For: Families, beginners, sunset paddles

3. Coronado Bay - Skyline Views & Navy SEALs

Every time I paddle under the Coronado Bridge, I'm reminded why I left the Midwest. The contrast between the graceful blue arc overhead and San Diego's skyline creates Instagram gold, but the real treat comes from the Navy SEAL training exercises you might witness along the Silver Strand.

Pro Tip: Time your paddle for sunset - watching the city lights flicker on while floating in Glorietta Bay remains one of my favorite San Diego moments. Just remember those essential safety tips about paddling in low light conditions.

Launch Point: Coronado Tidelands Park (2000 Mullinex Dr) Rentals: SUP & Saddle Parking: Free but fills up on weekends

4. Point Loma/Sunset Cliffs - For the Adventurous

This stretch of coastline isn't for beginners, but experienced paddlers will find some of San Diego's most dramatic scenery here. I once startled a sleeping seal on a hidden rock shelf near the tide pools - we were equally surprised!

Conditions: Can be challenging with wind and swells Launch: Temporarily use nearby beaches (check conditions first) Wildlife: Seals, dolphins, occasional whales

South Bay Hidden Treasures

5. South San Diego Bay National Wildlife Refuge

This 2,620-acre refuge feels worlds away from downtown despite being just 15 minutes south. I discovered this spot while searching for less crowded waters and found a kayaker's sanctuary where endangered least terns nest and bat rays cruise the shallows.

The salt marshes here remind me of the Everglades - narrow channels wind through cordgrass where great blue herons stand motionless, waiting for unwary fish. During winter months, I've counted over 50 species of birds in a single morning paddle.

Launch Point: Chula Vista Marina (550 Marina Parkway) Best Time: High tide for channel access Bring: Binoculars, sun protection

6. Chula Vista Bayside Park

Last summer, my kayaking club discovered this launch after the nearby boat ramp got too crowded. Now it's our secret Saturday morning spot - though I guess it's not so secret anymore! The protected waters make it perfect for practicing your paddle technique without fighting waves.

Why I Love It:

  • Free parking and easy launch
  • Calm water year-round
  • Access to both open bay and protected channels
  • Less crowded than northern spots

Inland Lake Escapes

7. Lake Cuyamaca - Mountain Serenity

Trading ocean salt for mountain pines, Lake Cuyamaca sits at 4,600 feet elevation surrounded by oak and pine forests. The 110-acre lake stays stocked with rainbow trout, making it ideal for kayak rentals San Diego visitors wanting to combine paddling with fishing.

I'll admit - after years of ocean paddling, I initially dismissed lake kayaking as "too tame." That changed the morning I watched the sun rise over the mountains while an osprey dove for trout 20 feet from my kayak. Sometimes peaceful is perfect.

Important: No inflatable kayaks allowed Rentals: Available at the marina Fishing: California license required

8. San Vicente Reservoir - San Diego's Largest Lake

This 1,069-acre reservoir reopened to kayakers in 2016 after years of expansion, and it's now our region's premier flatwater destination. The dramatic rocky shoreline reminds me of Lake Powell, especially when you paddle into the narrow northern fingers.

Rental Tip: Book ahead on weekends - limited kayaks available Distance: 14-mile shoreline perfect for all-day adventures Launch Fee: $10 per kayak

9. Lake Murray - Urban Convenience

Five minutes from my house, Lake Murray has become my after-work therapy session. This 171-acre reservoir within Mission Trails Regional Park offers three miles of shoreline perfect for a quick paddle. I've introduced dozens of friends to kayaking here - the calm water and easy parking remove every excuse not to try.

Sunset Alert: They close at sunset, so plan accordingly Parking: Free but limited Wildlife: Surprisingly good for being so urban

10. Lake Hodges - The Shape-Shifter

Depending on rainfall, Lake Hodges transforms dramatically. During wet years, its 27 miles of twisted shoreline create endless exploration opportunities. During drought years... well, let's just say I've hiked where I usually paddle.

When full, the narrow fingers and hidden coves make this feel more like paddling a river than a lake. The pedestrian bridge offers a unique paddle-under experience you won't find elsewhere in the county.

Check First: Water levels vary dramatically Best Section: West of the I-15 bridge Rental Info: Available when water levels permit

11. Lower Otay Lake - Olympic Training Waters

Home to the U.S. Olympic Training Center for rowing, Lower Otay offers some of the most consistently calm water in the county. The dramatic dam and surrounding mountains create a bowl that blocks most wind - no wonder olympians train here.

Entry Fee: $5 per person (worth it for the tranquility) Rentals: Rocky Mountain Recreation Company Best Feature: Designated no-wake zones

12. Lake Poway - Family Perfect

This small but scenic 60-acre lake punches above its weight for beauty. Surrounded by chaparral-covered hills and arguably offering the best beginner kayaking experience in North County, it's where I recommend parents take kids for their first paddle.

Kid-Friendly Features:

  • Never too far from shore
  • Consistent calm conditions
  • Plenty of ducks and turtles to spot
  • Picnic areas for post-paddle lunch

13. El Capitan Reservoir - The Adventure Lake

Recently reopened after years of drought closure, El Capitan's 22 miles of shoreline offer the most wilderness-style paddling in the county. The northern fork feels genuinely remote - I've paddled for hours without seeing another soul.

Bring: Plenty of water and sun protection Distance: Plan for longer paddles Scenery: Dramatic rocky shores and hidden coves

14. Lake Miramar - Quick Escape

When I have just two hours and need water therapy, Miramar delivers. This 162-acre reservoir may be small, but the wooded shoreline and resident osprey make it feel larger. The walking trail around the lake means non-paddling family members can still enjoy the outing.

Parking Tip: Arrive early on weekends Rentals: Available at the dock Loop Time: About 1 hour at casual pace

North County Coastal Gems

15. Carlsbad Lagoon (Agua Hedionda) - The All-Arounder

This 400-acre lagoon offers something for everyone. The outer lagoon connects to the ocean, providing mild ocean conditions without the full exposure. The inner lagoon stays glassy calm, perfect for SUP yoga or leisurely paddles.

I discovered the hidden creek inlet last year - paddle east from the main lagoon during high tide to find a mangrove-lined channel that feels transported from Florida. Sea turtles occasionally surface here, though they're frustratingly camera-shy.

Unique Feature: Only power plant-warmed lagoon (stays warmer year-round) Launch: Multiple spots around the lagoon Rentals: Carlsbad Lagoon

16. Batiquitos Lagoon - Nature Preserve Paddling

While more restricted than other spots, Batiquitos offers exceptional wildlife viewing when open for guided tours. The preservation efforts here created a thriving ecosystem - I counted 47 bird species during one December paddle.

Access: Limited to guided educational tours Wildlife: Exceptional birding, especially during migration Best Time: Winter months for bird diversity

17. San Elijo Lagoon - Hidden in Plain Sight

Most people drive over this lagoon on I-5 without realizing the paddling paradise below. The ecological reserve status means fewer crowds but incredible wildlife. Morning paddles here feel meditative - just you, the birds, and the gentle lap of water against your hull.

Launch: Cardiff State Beach during high tide Challenges: Tide dependent access Reward: Solitude and nature immersion

Ocean Beach & Bay Paddling

18. San Diego Bay Downtown - Urban Adventure

Paddling past the USS Midway while cruise ships tower overhead creates a uniquely San Diego experience. I love introducing out-of-town visitors to this route - where else can you kayak past a aircraft carrier, under a historic sailing ship, and alongside modern yachts in one trip?

Route Suggestion: Launch from Embarcadero Marina Park South, paddle north past the Maritime Museum, return via Seaport Village. The complete bay kayaking guide I wrote covers this route in detail.

Timing: Early morning avoids boat traffic Distance: 3-4 miles round trip Highlight: Sea lions at the bait barges

19. Mission Beach/Sail Bay - Surf and Turf

This spot offers the best of both worlds - launch in the calm bay, paddle through the channel, and you're in the open ocean. I've taught countless friends to surf their kayaks back through the gentle waves at the Mission Beach jetty.

Two Experiences in One:

  • Morning: Calm bay paddle
  • Afternoon: Ocean adventure (conditions permitting)

Parking: Challenging in summer Alternative: Launch from Bonita Cove for easier parking

20. Silver Strand State Beach - The Versatile Venue

Connecting Coronado to Imperial Beach, the Silver Strand offers both bay and ocean access. Choose your adventure based on conditions - rough ocean day? Paddle the calm bay side. Glassy ocean morning? Head for the open water.

Unique Experience: Watching Navy SEAL training exercises Beach Break: Some of the gentlest surf breaks for kayak surfing Distance Options: From quick paddles to all-day adventures

Essential San Diego Kayaking Info

Weather Windows & Seasonal Patterns

After a decade of paddling these waters, I've learned San Diego's weather patterns:

Best Overall Months: September-November (warm water, less wind) Morning Magic: Before 10 AM typically offers the calmest conditions May Gray/June Gloom: Don't let clouds deter you - often the calmest months Santa Ana Winds: Create gorgeous conditions but check fire warnings

What to Bring (Learned the Hard Way)?

My first summer here, I thought "it's always 72°F" meant I didn't need sun protection. That painful lesson taught me San Diego's sun reflects off water with vengeance. Here's my never-leave-shore-without list:

  • Sun Protection: Quality sun gear including reef-safe sunscreen
  • Hydration: More than you think you need
  • PFD: Required by law and common sense
  • Whistle: Attached to your PFD
  • Dry Bag: For phones/keys (learned this one the expensive way)

Choosing Tours vs. Rentals

Take a Tour If:

  • First time in ocean conditions
  • Want to enter the La Jolla caves safely
  • Interested in local history and marine biology
  • Prefer equipment and guidance included

Rent If:

  • Experienced paddler
  • Want to explore at your own pace
  • Planning multiple short trips
  • Comfortable reading conditions

Local Regulations & Etiquette

San Diego's popularity means sharing the water responsibly:

  • Marine Protected Areas: Respect no-take zones in La Jolla
  • Wildlife: Maintain 50+ yard distance from marine mammals
  • Right of Way: Kayaks yield to most other vessels
  • Launch Etiquette: Move quickly once launched
  • Leave No Trace: Pack out everything

Kayak Rental Companies & Tours

Top-Rated Tour Operators:

  1. La Jolla Kayak - Excellent cave tours, knowledgeable guides
  2. Everyday California - Great for beginners, photo packages available
  3. Bike & Kayak Tours - Combo adventures, good group rates
  4. OEX La Jolla - Sunset tours, advanced options

Rental Locations by Area:

  • Mission Bay: Aqua Adventures, Mission Bay Aquatic Center
  • La Jolla: Multiple shops along Avenida de la Playa
  • Coronado: SUP & Saddle
  • Lakes: Usually on-site at each location

Pricing Expectations (2025):

  • Hourly Rentals: $20-40
  • Half-Day: $40-70
  • Guided Tours: $50-109
  • Lake Rentals: Generally cheaper than ocean

Planning Your San Diego Kayaking Adventure

For First-Time Visitors:

Start with Mission Bay to get comfortable, then progress to La Jolla Shores for your ocean experience. Book a morning tour to see the caves, then spend the afternoon exploring on a rental.

For Families:

Mission Bay, Lake Murray, or Lake Poway offer the safest conditions. Many kids' kayaking programs operate from these locations during summer.

For Experienced Paddlers:

Launch early at La Jolla or Point Loma for open ocean paddling. Explore the lesser-known spots like South Bay Wildlife Refuge for solitude.

For Fishing Enthusiasts:

Lake Cuyamaca and San Vicente offer the best freshwater fishing. For ocean fishing, launch from La Jolla Shores or Mission Bay and paddle to kelp beds.

Seasonal Wildlife Calendar

January-March: Gray whale migration, sea lions pupping April-May: Wildflowers blooming at inland lakes June-September: Leopard sharks at La Jolla October-December: Best weather, warm water, clear visibility

Safety Considerations

Ten years of paddling here taught me respect for our conditions:

Ocean Hazards:

  • Afternoon winds typically increase after 11 AM
  • Summer south swells can create dangerous conditions
  • Always check surf reports before ocean launches
  • Never paddle alone in caves

Lake Considerations:

  • Some close at sunset (plan accordingly)
  • Water levels vary with rainfall
  • Wind can funnel through canyons creating choppy conditions

FAQ Section

Can you kayak year-round in San Diego?

Absolutely! That's the beauty of San Diego - I paddle every month of the year. Water temps range from 57°F in winter to 72°F in late summer, so you might want a wetsuit December through March, but it's always paddleable.

Do I need kayaking experience for La Jolla caves?

For safety, I recommend some ocean experience or taking a guided tour first. The caves look calm from shore, but surge conditions can change quickly. I've seen too many rental kayaks get into trouble here.

What's the best kayaking spot for beginners?

Mission Bay wins hands-down. No waves, multiple launch points, and plenty of room to practice. Lake Murray and Lake Poway are also excellent for first-timers who prefer freshwater.

How much do kayak rentals cost in San Diego?

Expect $20-40 per hour for basic rentals, $50-80 for half-day. Tours run $50-109 depending on length and location. Lake rentals typically cost less than ocean spots.

When can you see leopard sharks while kayaking?

June through September, with August being peak season. They gather in the shallow waters of La Jolla Shores to mate. Completely harmless and amazing to see!

Is it safe to kayak in San Diego Bay with ship traffic?

Stay near the shoreline and out of shipping channels. I've paddled here hundreds of times safely. The main channel is well-marked - just use common sense and stay alert.

Do I need to book kayak tours in advance?

During summer and weekends, definitely book ahead. I've seen tours sell out by 9 AM on busy days. Weekday mornings in off-season you can usually walk up.

What should I wear kayaking in San Diego?

Quick-dry clothing, sunglasses with retainer, and reef-safe sunscreen are essential. Avoid cotton - it stays wet and cold. In winter, consider a wetsuit for comfort.

Can kids go kayaking in San Diego?

Most tour companies take kids 5+ in tandem kayaks. For rentals, Mission Bay and the lakes are perfect for families. My nephew started at 6 and loves it.

Are there any free kayak launch spots?

Yes! Mission Bay has multiple free launches, as do Coronado Tidelands Park and various spots along San Diego Bay. Most lakes charge entry fees but launching is included.

Final Thoughts: Why San Diego Spoils Kayakers

Last week, I paddled with a visitor from the Great Lakes who couldn't believe our January water temperature. As we floated beside a curious sea lion pup, watching the sunset paint the cliffs gold, he said what I've heard countless times: "I could get used to this."

That's the thing about kayaking near San Diego - it's not just the perfect weather or abundant launch spots. It's the moment a dolphin surfaces beside your kayak, or when you realize you can paddle year-round without a drysuit, or when you discover another hidden cove that somehow escaped the crowds.

Whether you're planning a kayak tour San Diego style with guides and guaranteed wildlife sightings, or you prefer the freedom of kayak rentals San Diego offers at dozens of locations, our waters welcome paddlers of every skill level. From the wilderness feel of El Capitan Reservoir to the urban adventure of downtown bay paddling, from the thrill of surfing your kayak at Mission Beach to the zen of a sunrise paddle on glassy Lake Cuyamaca - San Diego truly offers something for every paddler.

So grab a paddle, slather on that sunscreen, and come discover why those of us lucky enough to call San Diego home can't imagine kayaking anywhere else. The water's warm, the views are spectacular, and I guarantee you'll plan your next trip before your paddle's even dry.

See you on the water!

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